Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826937.1_cds_XP_016502879.1_16473
CDS Infomation

[gene=LOC107821004] [db_xref=GeneID:107821004] [protein=pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like] [protein_id=XP_016502879.1] [location=complement(3329..5512)] [gbkey=CDS]
Sequence

ATGAAATTTCTGCACTGCCCATTTGAAGGTATGCTGAAAAGGTCGAAACTTTTGATTCAC
ATACGTGAAGAGCTAGGAACTCTGTATAAGAACCCTTCTTTTGCATTTTGTACTTGTATG
ACTGATGACAAGTGTGGTAACGCTAAAGGCAGTGGTGGGTCGGAGTCCGAGAATGAATGG
GAAAGATTGCTTAAGCCTTTTAACCTCAAGCAACTCCGAAGATCACTTAATAAAATTACC
CCGTATCAGCTCAATAAATTATTGGCACTGCCTTTGGATGTACCAACATCGATGGAGCTA
TTCCAGTGGGCTGGTAGCCAGACGAGCTATTGCCACTCATTTGATGTCTACTATACATTG
ATTGACAAACTTGGGGCTGCCAAGGAATTTAAGATTATAGATAGATTGTTATTACAGATG
AAAGAGGAAGGGGTAGTTTTCAAAGAGTCCCTCTTTATTGTGATAATGAAGCATTATGGA
AGAGCTGGTTTACCAGGGCAGGCAACTAGAATACTATTGGATATGTGGAATACTTTCTCA
TGTGAACCCACATTTAAGTCATATAATCAAGTATTGGATATTCTGTTGGCTGAAAATTGT
CCAAAAGTTGCTCCGAATGTGTTTTATGAAATGTTAGGGAAAGGTATTTCTCCTTCTGTA
TTCACTTTTTCTCGAGTGATACAAGCATTATGTATAGTCAATGAGGTAGACTCTGCTTGT
TCACTTCTTAGAGACATGACAAAACATGGGTGTGTACCAAATTCAGTGATTTACCAGATT
CTTATTCGTGCACTTTCAAAGTCTGATAGGGTAAATGATGCATTGAAACTTTTGGAGGAG
ATGTTTCTTATGGGTTGCATACCCGACATCAATACTTTCAATGACATTATCCATGGGCTT
TGTCGAGCTGATAGGATTCATGAGGCTGCAAAACTGGTGGATCGGATGCTTCTCCGAGGT
TTCACCCCCGATGCTATAACTTATGGCTTTCTGATGCATGCTTTATGTCGAACAGGGCGA
GTTGATGAAGCAAGGGTTCTTCTCAACAAAGCACCTGAGCAGAATAATATCATCTTTAAT
ATGTTGATTAATGGCTATGTGACTAATGGGCGGTTCGATGAAGCAAAATTCATTCTGAAT
GAGAACATGTTGATTAAAGGTTATCAACCAGATGTTTATACATACAACATTCTGATTCGA
GGTCTTTGCAAGAAGGGATCTTTGTCTTCGGCTCATGAAGTTGTAAAAGAAATGTCATCC
AAAAGTTGCCAGCCCAATGTGATCACGTACACAACCTTGATTGATGGCTTCTCCAAGGCT
GGCCGTCTACAGGAAGCTTATGACCTTGTTACTGAGATGTCAGTAAAAGGTCTCAGCCTA
AATATAGTGGGTTTTAACTCTCTTATATCAGCTTTGTGTAAACAAGGAATGATTCAACAG
GCATTAGAAATTTTTGGTGACATGTCAAGCAAAGGATGTAAACCAGACATTTTCACATTC
AATGCTTTGATTTCAGGTTTTTGCAAGGTAGACAAGATGGGTGAAGCATTGGGGATGTAT
CGAGATATGTTCCTTGAGGGAGTTATTGCCAATACAGTTACCTACAACACATTGATTCAT
GCTTTCTTGAGGAAAGGTAAAACCCAAGAGGCGCTTAAGCTTGTGAATGATATGCTATTC
AGAGGATGTCCCCTTGATGAAATCACATACAATGGCCTCGTAAAAGCACTTTGCAATGAT
GGAGCAATTGAGAGAGCAGTTGGACTTTTTGAAGAAATGCTGACAAAGGGAATAAAACCT
AATCATGTAACATGCAACATCTTGGTCAATGGCTTTTGTAGAATAGGGAAGGTTCAAAAT
GCCCTTGAGTTTCTGAGAGACCTGGTACATCGTGGATTGGCACCTGATATAGTCACGTAC
AACAGTCTAATAAATGGCTTTTGTAACAATGGTCGAATTCGAGAAGCTCACAGCCTCTTT
GAAAAATTAGAAGTTGAAGGAGTTTGTGCTGATGCTTTCACTTATAACACCTTGATTTCT
TCCTATTGTAAAATGCACATGCTTGATGATGCTTATACCCTGCTTACTAGAGGCATAGCT
GTTGGTTTCATTCCCAATAATGTCACATGGTACATACTCGTGAGAAATTTTGTTCGAAAG
AGTTATGAGTCACTAACGAGTTAG

Peptide Sequence

PEP ID

XP_016502879.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Nicotiana tabacum]
Sequence

MKFLHCPFEGMLKRSKLLIHIREELGTLYKNPSFAFCTCMTDDKCGNAKGSGGSESENEW
ERLLKPFNLKQLRRSLNKITPYQLNKLLALPLDVPTSMELFQWAGSQTSYCHSFDVYYTL
IDKLGAAKEFKIIDRLLLQMKEEGVVFKESLFIVIMKHYGRAGLPGQATRILLDMWNTFS
CEPTFKSYNQVLDILLAENCPKVAPNVFYEMLGKGISPSVFTFSRVIQALCIVNEVDSAC
SLLRDMTKHGCVPNSVIYQILIRALSKSDRVNDALKLLEEMFLMGCIPDINTFNDIIHGL
CRADRIHEAAKLVDRMLLRGFTPDAITYGFLMHALCRTGRVDEARVLLNKAPEQNNIIFN
MLINGYVTNGRFDEAKFILNENMLIKGYQPDVYTYNILIRGLCKKGSLSSAHEVVKEMSS
KSCQPNVITYTTLIDGFSKAGRLQEAYDLVTEMSVKGLSLNIVGFNSLISALCKQGMIQQ
ALEIFGDMSSKGCKPDIFTFNALISGFCKVDKMGEALGMYRDMFLEGVIANTVTYNTLIH
AFLRKGKTQEALKLVNDMLFRGCPLDEITYNGLVKALCNDGAIERAVGLFEEMLTKGIKP
NHVTCNILVNGFCRIGKVQNALEFLRDLVHRGLAPDIVTYNSLINGFCNNGRIREAHSLF
EKLEVEGVCADAFTYNTLISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRK
SYESLTS

Transcript Sequence

Gene sequence data has not been registered.